public class ObjectFactory extends Object
An ObjectFactory allows you to programatically construct new instances of the Java representation for XML content. The Java representation of XML content can consist of schema derived interfaces and classes representing the binding of schema type definitions, element declarations and model groups. Factory methods for each of these are provided in this class.
Constructor and Description |
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ObjectFactory()
Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.nmdp.ngs.sra.jaxb.experiment
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public ObjectFactory()
public Experiment createExperiment()
Experiment
public PipelineType createPipelineType()
PipelineType
public ReferenceSequenceType createReferenceSequenceType()
ReferenceSequenceType
public ReferenceAssemblyType createReferenceAssemblyType()
ReferenceAssemblyType
public ReferenceAssemblyType.Custom createReferenceAssemblyTypeCustom()
ReferenceAssemblyType.Custom
public LinkType createLinkType()
LinkType
public SpotDescriptorType createSpotDescriptorType()
SpotDescriptorType
public SpotDescriptorType.SpotDecodeSpec createSpotDescriptorTypeSpotDecodeSpec()
SpotDescriptorType.SpotDecodeSpec
public SpotDescriptorType.SpotDecodeSpec.ReadSpec createSpotDescriptorTypeSpotDecodeSpecReadSpec()
SpotDescriptorType.SpotDecodeSpec.ReadSpec
public SpotDescriptorType.SpotDecodeSpec.ReadSpec.ExpectedBasecallTable createSpotDescriptorTypeSpotDecodeSpecReadSpecExpectedBasecallTable()
SpotDescriptorType.SpotDecodeSpec.ReadSpec.ExpectedBasecallTable
public SampleDescriptorType createSampleDescriptorType()
SampleDescriptorType
public PoolMemberType createPoolMemberType()
PoolMemberType
public LibraryDescriptorType createLibraryDescriptorType()
LibraryDescriptorType
public LibraryDescriptorType.TargetedLoci createLibraryDescriptorTypeTargetedLoci()
LibraryDescriptorType.TargetedLoci
public LibraryDescriptorType.LibraryLayout createLibraryDescriptorTypeLibraryLayout()
LibraryDescriptorType.LibraryLayout
public PlatformType createPlatformType()
PlatformType
public IdentifierType createIdentifierType()
IdentifierType
public Experiment.StudyRef createExperimentStudyRef()
Experiment.StudyRef
public LibraryType createLibraryType()
LibraryType
public ProcessingType createProcessingType()
ProcessingType
public Experiment.ExperimentLinks createExperimentExperimentLinks()
Experiment.ExperimentLinks
public Experiment.ExperimentAttributes createExperimentExperimentAttributes()
Experiment.ExperimentAttributes
public ExperimentSet createExperimentSet()
ExperimentSet
public SequencingDirectivesType createSequencingDirectivesType()
SequencingDirectivesType
public NameType createNameType()
NameType
public AttributeType createAttributeType()
AttributeType
public QualifiedNameType createQualifiedNameType()
QualifiedNameType
public UrlType createUrlType()
UrlType
public XRefType createXRefType()
XRefType
public PipelineType.PipeSection createPipelineTypePipeSection()
PipelineType.PipeSection
public ReferenceSequenceType.Sequence createReferenceSequenceTypeSequence()
ReferenceSequenceType.Sequence
public ReferenceAssemblyType.Standard createReferenceAssemblyTypeStandard()
ReferenceAssemblyType.Standard
public ReferenceAssemblyType.Custom.UrlLink createReferenceAssemblyTypeCustomUrlLink()
ReferenceAssemblyType.Custom.UrlLink
public LinkType.EntrezLink createLinkTypeEntrezLink()
LinkType.EntrezLink
public LinkType.UrlLink createLinkTypeUrlLink()
LinkType.UrlLink
public SpotDescriptorType.SpotDecodeSpec.ReadSpec.RelativeOrder createSpotDescriptorTypeSpotDecodeSpecReadSpecRelativeOrder()
SpotDescriptorType.SpotDecodeSpec.ReadSpec.RelativeOrder
public SpotDescriptorType.SpotDecodeSpec.ReadSpec.ExpectedBasecallTable.Basecall createSpotDescriptorTypeSpotDecodeSpecReadSpecExpectedBasecallTableBasecall()
SpotDescriptorType.SpotDecodeSpec.ReadSpec.ExpectedBasecallTable.Basecall
public SampleDescriptorType.Pool createSampleDescriptorTypePool()
SampleDescriptorType.Pool
public PoolMemberType.ReadLabel createPoolMemberTypeReadLabel()
PoolMemberType.ReadLabel
public LibraryDescriptorType.TargetedLoci.Locus createLibraryDescriptorTypeTargetedLociLocus()
LibraryDescriptorType.TargetedLoci.Locus
public LibraryDescriptorType.LibraryLayout.Paired createLibraryDescriptorTypeLibraryLayoutPaired()
LibraryDescriptorType.LibraryLayout.Paired
public LibraryDescriptorType.LibraryLayout.Single createLibraryDescriptorTypeLibraryLayoutSingle()
LibraryDescriptorType.LibraryLayout.Single
public PlatformType.Capillary createPlatformTypeCapillary()
PlatformType.Capillary
public PlatformType.IonTorrent createPlatformTypeIonTorrent()
PlatformType.IonTorrent
public PlatformType.PacbioSmrt createPlatformTypePacbioSmrt()
PlatformType.PacbioSmrt
public PlatformType.CompleteGenomics createPlatformTypeCompleteGenomics()
PlatformType.CompleteGenomics
public PlatformType.AbiSolid createPlatformTypeAbiSolid()
PlatformType.AbiSolid
public PlatformType.Helicos createPlatformTypeHelicos()
PlatformType.Helicos
public PlatformType.Illumina createPlatformTypeIllumina()
PlatformType.Illumina
public PlatformType.Ls454 createPlatformTypeLs454()
PlatformType.Ls454
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